CysModDB:Cysteine post-translational modification database

Overview

Prediction Tools (External)

Tools Overview

In this page, we provide a series of online tools for users to analysis the proteins or sequences of interests. The proteins or sequences chosen in the basket can be automatically loaded in this page. Gene Ontology analysis performs statistical GO enrichment analysis to user-chosen modified proteins. Sequence logo and composition heatmap can visualization the amino acids consistence and frequency for one or two baskets.

Transfer Basket

When browsing through different modified proteins, you can select items from PTM table, and the selected items will be stored and showed in here for next analysis. If you want to compare two group of items, such as sequence from two kinds of PTM types or organisms, you can click and then transfer these items from default basket (Basket A) to another basket (Basket B) for next analysis.

Basket A:

> P52332 1130|S-oxidation(nec.)

KTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTTFQNLIEGFEALLK**
> P52332 61|S-oxidation(nec.)

VEVTFYLLDREPLRLGSGEYTAEELCIRAAQECSISPLCHNLFALYDESTK
> P52332 715|S-oxidation(nec.)

KFKVAKQLASALSYLEDKDLVHGNVCTKNLLLAREGIDSDIGPFIKLSDPG
> P52332 987|S-oxidation(nec.)

SLKEYLPKNKNKINLKQQLKYAIQICKGMDYLGSRQYVHRDLAARNVLVES
> P52332 762|S-oxidation(nec.)

SDPGIPVSVLTRQECIERIPWIAPECVEDSKNLSVAADKWSFGTTLWEICY
> P98083 196|S-oxidation(nec.)

EVLQSMRALDFNTRTQVTREAISLVCEAVPGAKGATRRRKPCSRPLSSILG
> P98083 412|S-oxidation(nec.)

GATLPIGQHAAGDHEVRKQMLPPPPCPGRELFDDPSYVNIQNLDKARQAGG
> P22682 351|S-oxidation(nec.)

LIDGFREGFYLFPDGRNQNPDLTGLCEPTPQDHIKVTQEQYELYCEMGSTF
> P22682 68|S-oxidation(nec.)

PHPPCTVDKKMVEKCWKLMDKVVRLCQNPKLALKNSPPYILDLLPDTYQHL
> P22682 382|S-oxidation(nec.)

DHIKVTQEQYELYCEMGSTFQLCKICAENDKDVKIEPCGHLMCTSCLTSWQ
> P42225 108|S-oxidation(nec.)

IRKSKRNLQDNFQEDPVQMSMIIYNCLKEERKILENAQRFNQAQEGNIQNT
> P42225 155|S-oxidation(nec.)

IQNTVMLDKQKELDSKVRNVKDQVMCIEQEIKTLEELQDEYDFKCKTSQNR
> P42225 324|S-oxidation(nec.)

QVLSDRTFLLFQQLIQSSFVVERQPCMPTHPQRPLVLKTGVQFTVKSRLLV
> Q01279 1051|S-oxidation(nec.)

FNSPSTSRTPLLSSLSATSNNSTVACINRNGSCRVKEDAFLQRYSSDPTGA
> Q01279 1146|S-oxidation(nec.)

RDLHYQNPHSNAVGNPEYLNTAQPTCLSSGFNSPALWIQKGSHQMSLDNPD
> Q01279 291|S-oxidation(nec.)

PLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGPDYY
> Q01279 337|S-oxidation(nec.)

GPDYYEVEEDGIRKCKKCDGPCRKVCNGIGIGEFKDTLSINATNIKHFKYC
> Q01279 362|S-oxidation(nec.)

CNGIGIGEFKDTLSINATNIKHFKYCTAISGDLHILPVAFKGDSFTRTPPL
> Q01279 777|S-oxidation(nec.)

ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPYGCLLD
> Q01279 820|S-oxidation(nec.)

MPYGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV
> Q01279 952|S-oxidation(nec.)

SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELILEFSKMARDP

Basket B:

> Q01279 157|S-palmitoylation

LRELPMRNLQEILIGAVRFSNNPILCNMDTIQWRDIVQNVFMSNMSMDLQS
> Q01279 470|S-palmitoylation

ITSLGLRSLKEISDGDVIISGNRNLCYANTINWKKLFGTPNQKTKIMNNRA
> Q01279 337|S-palmitoylation

GPDYYEVEEDGIRKCKKCDGPCRKVCNGIGIGEFKDTLSINATNIKHFKYC
> Q01279 362|S-palmitoylation

CNGIGIGEFKDTLSINATNIKHFKYCTAISGDLHILPVAFKGDSFTRTPPL
> Q01279 291|S-palmitoylation

PLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGPDYY
> Q01279 215|S-palmitoylation

CDPSCPNGSCWGGGEENCQKLTKIICAQQCSHRCRGRSPSDCCHNQCAAGC
> Q01279 291|S-palmitoylation

PLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGPDYY
> Q01279 307|S-palmitoylation

EGKYSFGATCVKKCPRNYVVTDHGSCVRACGPDYYEVEEDGIRKCKKCDGP
> Q01279 362|S-palmitoylation

CNGIGIGEFKDTLSINATNIKHFKYCTAISGDLHILPVAFKGDSFTRTPPL
> P98083 412|S-itaconation

GATLPIGQHAAGDHEVRKQMLPPPPCPGRELFDDPSYVNIQNLDKARQAGG
> P52332 16|S-palmitoylation

**********MQYLNIKEDCNAMAFCAKMRSFKKTEVKQVVPEPGVEVTFY
> Q01279 311|S-palmitoylation

SFGATCVKKCPRNYVVTDHGSCVRACGPDYYEVEEDGIRKCKKCDGPCRKV